Basic Information
Locus ID:
gene_22125
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 2885188 | 2888386 | + | gene_22125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 73,493.30 Da | 32.84 | 108.09 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 154 | 214 | 4.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 513 | 550 | 2.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 300 | 359 | 6.4E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 251 | 273 | 0.61 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 86 | 126 | 2.2E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 289 | 610 | 3.06E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 117 | 383 | 6.8E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 441 | 3.9E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 442 | 627 | 2.3E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 86 | 195 | 1.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 284 | 6.5E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 176 | 200 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 321 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 537 | 561 | 5.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 394 | 418 | 18.0 | IPR003591 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_018808946.2 | receptor protein kinase CLAVATA1-like [Juglans regia] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2I4DP72 | receptor protein kinase CLAVATA1-like OS=Juglans regia OX=51240 GN=LOC108982113 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_22125, gene_22126 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011420 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41641, Sgl46440 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011472 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0003080 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049220 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G21477 |
| Casuarinaceae | Casuarina equisetifolia | 4 | Ceq01G0192, Ceq01G0193, Ceq01G0196, Ceq03G0864 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl01G0214, Cgl01G0215, Cgl03G0944 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1770, evm.TU.LG14.985 |