Basic Information
Locus ID:
gene_22061
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 2225797 | 2240394 | + | gene_22061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 139,949.11 Da | 39.76 | 82.97 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 963 | 1228 | 3.60207E-93 | - |
| CDD | cd14066 | STKc_IRAK | 349 | 586 | 1.05056E-86 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 233 | 3.0E-57 | IPR001938 |
| Pfam | PF00069 | Protein kinase domain | 958 | 1157 | 2.0E-48 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 346 | 546 | 1.6E-47 | IPR001245 |
| Pfam | PF00314 | Thaumatin family | 650 | 844 | 6.6E-52 | IPR001938 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 943 | 1249 | 2.02E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 583 | 5.66E-76 | IPR011009 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 25 | 234 | 9.03E-59 | IPR037176 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 645 | 845 | 3.14E-59 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1033 | 1235 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 919 | 1032 | 2.6E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 418 | 3.2E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 419 | 602 | 2.0E-51 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 233 | 1.1E-62 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 644 | 845 | 5.7E-63 | IPR037176 |
| SMART | SM00220 | serkin_6 | 957 | 1204 | 7.8E-38 | IPR000719 |
| SMART | SM00205 | tha2 | 646 | 844 | 5.8E-63 | IPR001938 |
| SMART | SM00220 | serkin_6 | 343 | 639 | 6.1E-37 | IPR000719 |
| SMART | SM00205 | tha2 | 27 | 233 | 6.6E-63 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 645 | 844 | 33.782749 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 957 | 1244 | 38.237431 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 343 | 605 | 38.039555 | IPR000719 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 26 | 233 | 34.383919 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 82 | 98 | - | IPR017949 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 349 | 371 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1078 | 1090 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 464 | 476 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 963 | 985 | - | IPR017441 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 736 | 752 | 1.2E-13 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 686 | 697 | 1.2E-13 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 834 | 843 | 1.2E-13 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 665 | 674 | 1.2E-13 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 698 | 727 | 1.2E-13 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 645 | 657 | 1.2E-13 | IPR001938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 888 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 888 | - | - |
| Coils | Coil | Coil | 306 | 326 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021719634.1 | cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803M241 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22061 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40868, Sbi_jg40875 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1602, Seu_jg1603, Seu_jg4259 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017178 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ... |