HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene_22061
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_2_Chr_2 2225797 2240394 + gene_22061
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.30 139,949.11 Da 39.76 82.97 -0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 963 1228 3.60207E-93 -
CDD cd14066 STKc_IRAK 349 586 1.05056E-86 -
Pfam PF00314 Thaumatin family 31 233 3.0E-57 IPR001938
Pfam PF00069 Protein kinase domain 958 1157 2.0E-48 IPR000719
Pfam PF07714 Protein tyrosine and serine/threonine kinase 346 546 1.6E-47 IPR001245
Pfam PF00314 Thaumatin family 650 844 6.6E-52 IPR001938
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 943 1249 2.02E-81 IPR011009
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 325 583 5.66E-76 IPR011009
SUPERFAMILY SSF49870 Osmotin, thaumatin-like protein 25 234 9.03E-59 IPR037176
SUPERFAMILY SSF49870 Osmotin, thaumatin-like protein 645 845 3.14E-59 IPR037176
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1033 1235 1.6E-58 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 919 1032 2.6E-37 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 305 418 3.2E-37 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 419 602 2.0E-51 -
Gene3D G3DSA:2.60.110.10 Thaumatin 25 233 1.1E-62 IPR037176
Gene3D G3DSA:2.60.110.10 Thaumatin 644 845 5.7E-63 IPR037176
SMART SM00220 serkin_6 957 1204 7.8E-38 IPR000719
SMART SM00205 tha2 646 844 5.8E-63 IPR001938
SMART SM00220 serkin_6 343 639 6.1E-37 IPR000719
SMART SM00205 tha2 27 233 6.6E-63 IPR001938
ProSiteProfiles PS51367 Thaumatin family profile. 645 844 33.782749 IPR001938
ProSiteProfiles PS50011 Protein kinase domain profile. 957 1244 38.237431 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 343 605 38.039555 IPR000719
ProSiteProfiles PS51367 Thaumatin family profile. 26 233 34.383919 IPR001938
ProSitePatterns PS00316 Thaumatin family signature. 82 98 - IPR017949
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 349 371 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1078 1090 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 464 476 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 963 985 - IPR017441
PRINTS PR00347 Pathogenesis-related protein signature 736 752 1.2E-13 IPR001938
PRINTS PR00347 Pathogenesis-related protein signature 686 697 1.2E-13 IPR001938
PRINTS PR00347 Pathogenesis-related protein signature 834 843 1.2E-13 IPR001938
PRINTS PR00347 Pathogenesis-related protein signature 665 674 1.2E-13 IPR001938
PRINTS PR00347 Pathogenesis-related protein signature 698 727 1.2E-13 IPR001938
PRINTS PR00347 Pathogenesis-related protein signature 645 657 1.2E-13 IPR001938
MobiDBLite mobidb-lite consensus disorder prediction 253 275 - -
MobiDBLite mobidb-lite consensus disorder prediction 859 888 - -
MobiDBLite mobidb-lite consensus disorder prediction 874 888 - -
Coils Coil Coil 306 326 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. 0
RefSeq XP_021719634.1 cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa] 0
Swiss-Prot O65468 Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 0
TrEMBL A0A803M241 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_22061
Amaranthaceae Salicornia bigelovii 2 Sbi_jg40868, Sbi_jg40875
Amaranthaceae Salicornia europaea 3 Seu_jg1602, Seu_jg1603, Seu_jg4259
Amaranthaceae Suaeda aralocaspica 1 GOSA_00017178
Amaranthaceae Suaeda glauca 5 Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932
Amaranthaceae Chenopodium album 4 gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ...
gene:ENSEOMG00000031988, gene:ENSEOMG00000047252
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450
Portulacaceae Portulaca oleracea 4 evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ...
evm.TU.LG20.1082
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.