Basic Information
Locus ID:
gene_21886
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 36564064 | 36569065 | - | gene_21886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 143,145.20 Da | 43.74 | 78.63 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 548 | 793 | 7.35877E-134 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 934 | 1199 | 7.4E-116 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 576 | 735 | 1.8E-29 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 569 | 710 | 9.61E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 543 | 793 | 7.4E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 453 | 1205 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 573 | 802 | 33.052822 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 823 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 855 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 498 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_010690410.2 | translocase of chloroplast 120, chloroplastic [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | I3XHK3 | Chloroplast preprotein import receptor Toc132 OS=Bienertia sinuspersici OX=338654 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology