Basic Information
Locus ID:
gene_21814
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
DHS2
Description:
Phospho-2-dehydro-3-deoxyheptonate aldolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 35593027 | 35597793 | - | gene_21814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 57,396.40 Da | 39.75 | 74.32 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01474 | Class-II DAHP synthetase family | 61 | 497 | 2.5E-196 | IPR002480 |
| SUPERFAMILY | SSF51569 | Aldolase | 53 | 501 | 1.17E-201 | - |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 249 | 502 | 7.1E-110 | IPR013785 |
| TIGRFAM | TIGR01358 | DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase | 61 | 504 | 1.8E-233 | IPR002480 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
map00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33510.1 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase. Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis | 0 |
| RefSeq | XP_021753224.1 | phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q00218 | Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9S2N1 | Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Spinacia oleracea OX=3562 GN=SOVF_006640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology