Basic Information
Locus ID:
gene_21585
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 32271185 | 32292748 | - | gene_21585 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 341,739.69 Da | 53.72 | 84.58 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 312 | 643 | 5.1E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 306 | 677 | 1.9E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 301 | 655 | 3.1E-136 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 304 | 651 | 1.3E-165 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 306 | 643 | 121.895279 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 539 | 550 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 593 | 614 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 378 | 399 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 540 | 558 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 507 | 524 | 4.2E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1076 | 1103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2981 | 3005 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1073 | 1103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2622 | 2653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2981 | 3013 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 706 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2622 | 2636 | - | - |
| Coils | Coil | Coil | 2345 | 2386 | - | - |
| Coils | Coil | Coil | 2176 | 2203 | - | - |
| Coils | Coil | Coil | 657 | 677 | - | - |
| Coils | Coil | Coil | 2300 | 2330 | - | - |
| Coils | Coil | Coil | 1014 | 1041 | - | - |
| Coils | Coil | Coil | 892 | 912 | - | - |
| Coils | Coil | Coil | 1306 | 1326 | - | - |
| Coils | Coil | Coil | 2759 | 2800 | - | - |
| Coils | Coil | Coil | 1700 | 1755 | - | - |
| Coils | Coil | Coil | 2941 | 2975 | - | - |
| Coils | Coil | Coil | 2555 | 2589 | - | - |
| Coils | Coil | Coil | 1281 | 1301 | - | - |
| Coils | Coil | Coil | 1125 | 1145 | - | - |
| Coils | Coil | Coil | 2394 | 2414 | - | - |
| Coils | Coil | Coil | 1633 | 1653 | - | - |
| Coils | Coil | Coil | 2071 | 2098 | - | - |
| Coils | Coil | Coil | 2120 | 2154 | - | - |
| Coils | Coil | Coil | 736 | 770 | - | - |
| Coils | Coil | Coil | 1049 | 1069 | - | - |
| Coils | Coil | Coil | 2671 | 2698 | - | - |
| Coils | Coil | Coil | 2422 | 2456 | - | - |
| Coils | Coil | Coil | 1566 | 1593 | - | - |
| Coils | Coil | Coil | 1147 | 1216 | - | - |
| Coils | Coil | Coil | 1397 | 1424 | - | - |
| Coils | Coil | Coil | 2485 | 2547 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R8G0 | Kinesin motor domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_101620 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology