Basic Information
Locus ID:
gene_21455
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
DNA-directed DNA polymerase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 30356389 | 30361384 | - | gene_21455 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 26,848.53 Da | 40.04 | 90.25 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021776151.1 | uncharacterized protein LOC110739977 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MC10 | N-acetyltransferase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg26296 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_21452, gene_21455 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah009227 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g222980 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31333, Sbi_jg57951 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25580 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004469 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl54523, Sgl59862 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019481, gene:ENSEOMG00000038331 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7BG0000220, CQ.Regalona.r1.9AG0024200 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30205290 |
| Apiaceae | Apium graveolens | 1 | Ag6G02670 |
| Arecaceae | Cocos nucifera | 1 | COCNU_13G007010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103718567, gene-LOC120107550 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.1234.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G18971 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011799m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0137_0020.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB04g060470.2N |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq09G0253, Ceq09G0255, Ceq09G0259 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g13740 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0882s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g32340 |
| Nitrariaceae | Nitraria sibirica | 3 | evm.TU.LG02.1635, evm.TU.LG08.608, evm.TU.LG11.411 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00007774 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G18614, Lb6G31099 |
| Poaceae | Echinochloa crus-galli | 2 | BH01.1639, CH01.1717 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2BG0177230 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0442710.1, HORVU.MOREX.r3.5HG0445710.1 |
| Poaceae | Oryza coarctata | 2 | Oco19G002640, Oco20G002810 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g21020.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K046800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0201387, Pt_Chr0201418 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr04G005550, Chr07G006030, Chr13G017640 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G168500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG013000, gene_TRIDC5BG014970 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G084900.1, TraesCS5B02G090900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb019030_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-27692 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13103 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.1853, evm.TU.LG15.1309 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g25730, gene.Posoc03g25830 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.410 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5819 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-9746 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.712 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004955 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2553 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16502 |
| Salicaceae | Populus euphratica | 2 | populus_peu01622, populus_peu36213 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132598939 |
| Solanaceae | Solanum chilense | 1 | SOLCI001927500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014508 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_720 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G1983 |
| Zosteraceae | Zostera marina | 1 | Zosma05g28570.v3.1 |