Basic Information
Locus ID:
gene_21426
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 29832432 | 29838044 | - | gene_21426 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 38,653.75 Da | 44.27 | 92.32 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 100 | 323 | 5.2E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 323 | 1.57E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 51 | 335 | 4.6E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 341 | 18.251953 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24030.4 | - | 0 |
| RefSeq | XP_010691064.1 | cysteine-rich receptor-like protein kinase 43 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q84M95 | Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R9U7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_095100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_21426 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah010414 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g218980 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11642, Sbi_jg46755 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20896 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001860 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl56023, Sgl60569, Sgl61216 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016796, gene:ENSEOMG00000037103 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7BG0009100 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.1811, evm.TU.LG15.1355 |