Basic Information
Locus ID:
gene_21304
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 27712702 | 27721221 | - | gene_21304 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 82,377.46 Da | 47.41 | 72.09 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 167 | 442 | 6.68936E-125 | - |
| Pfam | PF00069 | Protein kinase domain | 167 | 406 | 3.2E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 167 | 455 | 5.53E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 460 | 2.5E-81 | - |
| SMART | SM00220 | serkin_6 | 167 | 464 | 3.4E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 167 | 452 | 23.792482 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 173 | 206 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 294 | 306 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021891921.1 | casein kinase 1-like protein HD16 [Carica papaya] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1B6A9 | casein kinase 1-like protein HD16 OS=Herrania umbratica OX=108875 GN=LOC110424664 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology