HalophFGD

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Basic Information
Locus ID: gene_21191
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: Belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_5_Chr_4 25672482 25684271 - gene_21191
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.56 75,985.11 Da 43.51 80.21 -0.39
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01433 Ribosomal_L16_L10e 493 618 2.75744E-43 IPR016180
CDD cd14137 STKc_GSK3 84 376 0.0 IPR039192
Pfam PF00252 Ribosomal protein L16p/L10e 464 618 3.7E-35 IPR016180
Pfam PF00069 Protein kinase domain 89 373 1.2E-63 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 88 400 1.13E-88 IPR011009
SUPERFAMILY SSF54686 Ribosomal protein L16p/L10e 456 625 4.97E-74 IPR036920
Gene3D G3DSA:3.90.1170.10 Ribosomal protein L10e/L16 453 670 1.3E-116 IPR036920
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 74 168 4.0E-33 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 169 416 2.6E-81 -
SMART SM00220 serkin_6 89 373 1.4E-89 IPR000719
TIGRFAM TIGR00279 uL16_euk_arch: ribosomal protein uL16 453 626 1.2E-75 IPR001197
ProSiteProfiles PS50011 Protein kinase domain profile. 89 373 43.834492 IPR000719
ProSitePatterns PS01257 Ribosomal protein L10e signature. 560 581 - IPR018255
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 95 119 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 210 222 - IPR008271
MobiDBLite mobidb-lite consensus disorder prediction 15 37 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 57 - -
Gene Ontology
Biological Process:
GO:0006412 (translation) GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0003735 (structural constituent of ribosome) GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
Cellular Component:
GO:0005840 (ribosome)
KEGG Pathway
KO Term:
K03083 (glycogen synthase kinase 3 beta [EC:2.7.11.26])
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance) map01521 (EGFR tyrosine kinase inhibitor resistance) ko04012 (ErbB signaling pathway) map04012 (ErbB signaling pathway) ko04062 (Chemokine signaling pathway) map04062 (Chemokine signaling pathway) ko04110 (Cell cycle) map04110 (Cell cycle) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway) ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly) ko04390 (Hippo signaling pathway) map04390 (Hippo signaling pathway) ko04550 (Signaling pathways regulating pluripotency of stem cells) map04550 (Signaling pathways regulating pluripotency of stem cells) map04657 (IL-17 signaling pathway) map04660 (T cell receptor signaling pathway) map04662 (B cell receptor signaling pathway) ko04711 (Circadian rhythm - fly) map04711 (Circadian rhythm - fly) ko04916 (Melanogenesis) map04916 (Melanogenesis)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G30980.1 SHAGGY-related protein kinase dZeta. Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. 0
RefSeq XP_010689734.2 shaggy-related protein kinase eta isoform X1 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot Q39010 Shaggy-related protein kinase zeta OS=Arabidopsis thaliana OX=3702 GN=ASK6 PE=1 SV=2 0
TrEMBL A0A0J8BPP6 non-specific serine/threonine protein kinase OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g209060 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 7 jg24978, jg3087, jg31479, jg33138, jg35704, jg4071, jg8419
Aizoaceae Mesembryanthemum crystallinum 2 gene_21191, gene_5244
Amaranthaceae Atriplex hortensis 2 Ah031383, Ah035994
Amaranthaceae Beta vulgaris 2 BVRB_7g157900, BVRB_7g157910
Amaranthaceae Salicornia bigelovii 4 Sbi_jg20475, Sbi_jg2257, Sbi_jg23295, Sbi_jg34244
Amaranthaceae Salicornia europaea 2 Seu_jg17090, Seu_jg2498
Amaranthaceae Suaeda aralocaspica 2 GOSA_00005983, GOSA_00014184
Amaranthaceae Suaeda glauca 6 Sgl20749, Sgl24808, Sgl26131, Sgl29956, Sgl71003, Sgl74595
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000008125, gene:ENSEOMG00000019396 ...
gene:ENSEOMG00000034166, gene:ENSEOMG00000038527, gene:ENSEOMG00000042831, gene:ENSEOMG00000048300
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.1AG0022530, CQ.Regalona.r1.1BG0001700
Anacardiaceae Pistacia vera 2 pistato.v30131770, pistato.v30178280
Apiaceae Apium graveolens 2 Ag2G01238, Ag3G01866
Arecaceae Phoenix dactylifera 2 gene-LOC103702162, gene-LOC103722181
Asparagaceae Asparagus officinalis 2 AsparagusV1_05.579.V1.1, AsparagusV1_08.3322.V1.1
Asteraceae Flaveria trinervia 5 Ftri10G12676, Ftri11G29204, Ftri12G05425, Ftri9G20966 ...
Ftri9G25085
Brassicaceae Arabidopsis thaliana 3 AT1G14320.1, AT1G26910.1, AT1G66580.1
Brassicaceae Eutrema salsugineum 2 Thhalv10008763m.g.v1.0, Thhalv10019112m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp1g12670.v2.2, Sp1g21870.v2.2, Sp5g24860.v2.2
Brassicaceae Brassica nigra 6 BniB02g009370.2N, BniB03g005950.2N, BniB03g041220.2N ...
BniB03g047380.2N, BniB05g066710.2N, BniB06g039320.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq08G2470
Casuarinaceae Casuarina glauca 1 Cgl08G2716
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno04g11800, gene.Cymno05g12890
Dunaliellaceae Dunaliella salina 1 Dusal.0318s00002.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate02g36800, gene.Thate05g04400, gene.Thate07g00540
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-3206, nbisL1-mrna-4138
Nitrariaceae Nitraria sibirica 1 evm.TU.LG02.1654
Plantaginaceae Plantago ovata 5 Pov_00024824, Pov_00024826, Pov_00029216, Pov_00036719 ...
Pov_00039572
Plumbaginaceae Limonium bicolor 2 Lb1G04520, Lb2G15317
Poaceae Echinochloa crus-galli 12 AH01.3750, AH05.1094, AH05.1108, AH07.971, BH01.4097 ...
BH05.1143, BH05.1165, BH07.1089, CH01.4360, CH05.1290, CH05.1307, CH07.857
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_1AG0027850, gene-QOZ80_1BG0078020 ...
gene-QOZ80_3AG0220680, gene-QOZ80_3BG0265770, gene-QOZ80_9AG0685090
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.1HG0026070.1, HORVU.MOREX.r3.4HG0345200.1
Poaceae Lolium multiflorum 2 gene-QYE76_009812, gene-QYE76_064275
Poaceae Oryza coarctata 5 Oco05G012730, Oco09G003260, Oco10G003220, Oco15G003360 ...
Oco21G003300
Poaceae Oryza sativa 2 LOC_Os05g07700.1, LOC_Os11g11390.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G163100, gene-BS78_01G364700 ...
gene-BS78_04G099000, gene-BS78_05G131400
Poaceae Puccinellia tenuiflora 3 Pt_Chr0306526, Pt_Chr0501700, Pt_Chr0501745
Poaceae Sporobolus alterniflorus 8 Chr01G007860, Chr02G013350, Chr03G012990, Chr04G010580 ...
Chr04G026220, Chr07G025160, Chr08G013240, Chr12G029440
Poaceae Thinopyrum elongatum 4 Tel1E01G209500, Tel2E01G1012100, Tel4E01G174000 ...
Tel4E01G311100
Poaceae Triticum dicoccoides 6 gene_TRIDC1AG014450, gene_TRIDC1BG019620 ...
gene_TRIDC4AG018490, gene_TRIDC4AG032570, gene_TRIDC4BG016840, gene_TRIDC4BG031150
Poaceae Triticum aestivum 8 TraesCS1A02G112500.1, TraesCS1B02G132700.1 ...
TraesCS1D02G114100.1, TraesCS4A02G204800.1, TraesCS4B02G108400.1, TraesCS4B02G171600.1, TraesCS4D02G105600.1, TraesCS4D02G173700.1
Poaceae Zea mays 3 Zm00001eb049570_P004, Zm00001eb150930_P001 ...
Zm00001eb219490_P005
Poaceae Zoysia japonica 3 nbis-gene-15804, nbis-gene-3377, nbis-gene-51722
Poaceae Zoysia macrostachya 4 Zma_g3034, Zma_g3693, Zma_g726, Zma_g8392
Portulacaceae Portulaca oleracea 6 evm.TU.LG03.873, evm.TU.LG07.384, evm.TU.LG07.481 ...
evm.TU.LG12.863, evm.TU.LG15.460, evm.TU.LG15.562
Posidoniaceae Posidonia oceanica 4 gene.Posoc01g27450, gene.Posoc01g27460, gene.Posoc01g27470 ...
gene.Posoc01g40140
Rhizophoraceae Bruguiera sexangula 2 evm.TU.42613.1, evm.TU.Scaffold_16_RagTag.702
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-14004, nbisL1-mrna-24873
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-3352, nbisL1-mrna-3353
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-19107, nbisL1-mrna-19108
Rhizophoraceae Kandelia candel 2 add.evm.TU.utg000022l.63, evm.TU.utg000022l.146
Rhizophoraceae Kandelia obovata 1 Maker00016201
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-148, nbisL1-mrna-149, nbisL1-mrna-23164
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-10405, nbisL1-mrna-10406
Salicaceae Populus euphratica 2 populus_peu14521, populus_peu17033
Solanaceae Lycium barbarum 4 gene-LOC132602810, gene-LOC132605765, gene-LOC132605766 ...
gene-LOC132606688
Solanaceae Solanum chilense 2 SOLCI001735900, SOLCI002583300
Solanaceae Solanum pennellii 3 gene-LOC107023517, gene-LOC107023542, gene-LOC107023544
Tamaricaceae Reaumuria soongarica 3 STRG.6391_chr04_-, gene_1514, gene_17002
Tamaricaceae Tamarix chinensis 2 TC03G2640, TC06G0834
Zosteraceae Zostera marina 1 Zosma02g17340.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.