Basic Information
Locus ID:
gene_21107
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 24381575 | 24383962 | - | gene_21107 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 20,604.10 Da | 66.88 | 82.18 | -0.59 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15070.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_028080807.1 | probable E3 ubiquitin-protein ligase ZFP1 [Camellia sinensis] | 0 |
| TrEMBL | A0A4S4E086 | RING-type domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_004247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_21106, gene_21107 |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G30016, Ftri9G03016 |
| Plantaginaceae | Plantago ovata | 7 | Pov_00005098, Pov_00012293, Pov_00017219, Pov_00027224 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132608268 |