Basic Information
Locus ID:
gene_2109
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4257004 | 4271791 | + | gene_2109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 81,544.45 Da | 46.99 | 110.52 | 0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 189 | 344 | 2.7E-33 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 357 | 626 | 7.1E-71 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 168 | 1.1E-35 | IPR032880 |
| Coils | Coil | Coil | 275 | 295 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_031386213.1 | CSC1-like protein At1g69450 isoform X1 [Punica granatum] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I0L480 | CSC1-like protein At1g69450 isoform X1 OS=Punica granatum OX=22663 GN=LOC116199818 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology