Basic Information
Locus ID:
gene_21023
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 22608463 | 22618299 | - | gene_21023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 86,447.13 Da | 48.66 | 88.30 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 1.3E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 508 | 779 | 4.8E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 177 | 3.6E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 235 | 1.81E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 481 | 780 | 2.77E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 249 | 3.2E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 582 | 2.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 583 | 792 | 9.3E-53 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 505 | 784 | 35.806381 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_048492763.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9D3V8 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology