Basic Information
Locus ID:
gene_2081
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box protein At3g07870-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 6516500 | 6522366 | - | gene_2081 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 33,663.58 Da | 34.35 | 76.56 | -0.12 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_010672364.3 | F-box protein At3g07870 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KTG3 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_20658, gene_2081, gene_2082 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah019416, Ah019422, Ah022664 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_3g057410, BVRB_3g057420, BVRB_3g057440 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg25994 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18863 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00006329, GOSA_00006330, GOSA_00024058, GOSA_00024059 |
| Amaranthaceae | Suaeda glauca | 15 | Sgl01754, Sgl01755, Sgl01758, Sgl06912, Sgl06913, Sgl06914 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0010010, CQ.Regalona.r1.3BG0010170 |
| Salicaceae | Populus euphratica | 1 | populus_peu00550 |