HalophFGD

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Basic Information
Locus ID: gene_20502
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: F-box associated
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_5_Chr_4 1007831 1009095 - gene_20502
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.97 25,646.44 Da 67.33 81.05 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 4 42 3.8E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 76 4.06E-13 IPR036047
Gene3D G3DSA:1.20.1280.50 - 6 44 9.8E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048495051.1 F-box protein At5g49610 [Beta vulgaris subsp. vulgaris] 0
TrEMBL G7JPX2 F-box protein interaction domain protein OS=Medicago truncatula OX=3880 GN=MTR_4g107780 PE=4 SV=2 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_20502
Poaceae Lolium multiflorum 3 gene-QYE76_063388, gene-QYE76_063389, gene-QYE76_063393
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.