Basic Information
Locus ID:
gene_20262
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Glutelin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 31278973 | 31281481 | + | gene_20262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 38,301.43 Da | 29.34 | 90.62 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 173 | 2.41087E-68 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 5.56748E-80 | - |
| Pfam | PF00190 | Cupin | 17 | 156 | 1.5E-27 | IPR006045 |
| Pfam | PF00190 | Cupin | 199 | 335 | 7.7E-23 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 34 | 345 | 3.57E-51 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 195 | 1.1E-34 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 196 | 356 | 2.1E-50 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 7.1E-32 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 6.3E-17 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 9.5E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 9.5E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 9.5E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 9.5E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 9.5E-14 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021764762.1 | 12S seed storage globulin 2-like [Chenopodium quinoa] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MQG8 | 11S globulin OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology