Basic Information
Locus ID:
gene_20243
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CTR1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 30443246 | 30456557 | + | gene_20243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 92,733.74 Da | 56.49 | 81.37 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 563 | 811 | 2.75993E-130 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 559 | 811 | 6.1E-69 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 173 | 379 | 2.7E-80 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 546 | 830 | 1.62E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 550 | 635 | 1.8E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 636 | 821 | 4.1E-62 | - |
| SMART | SM00220 | serkin_6 | 557 | 815 | 2.9E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 557 | 815 | 45.134823 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 678 | 690 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 563 | 584 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 719 | 729 | 8.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 672 | 690 | 8.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 631 | 644 | 8.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 738 | 760 | 8.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 782 | 804 | 8.1E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_021743318.1 | serine/threonine-protein kinase CTR1-like [Chenopodium quinoa] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QF25 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_186410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology