Basic Information
Locus ID:
gene_19902
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 13433792 | 13442319 | + | gene_19902 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 114,912.96 Da | 58.77 | 76.47 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 475 | 793 | 7.1E-106 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 28 | 131 | 6.2E-8 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 25 | 135 | 1.11E-13 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 469 | 833 | 2.55E-116 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 24 | 133 | 1.2E-15 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 411 | 797 | 1.0E-130 | IPR036961 |
| Gene3D | G3DSA:1.20.5.170 | - | 308 | 343 | 1.8E-5 | - |
| SMART | SM00129 | kinesin_4 | 467 | 803 | 1.4E-162 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 26 | 133 | 15.513931 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 469 | 795 | 112.429054 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 695 | 706 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 665 | 682 | 3.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 745 | 766 | 3.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 543 | 564 | 3.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 696 | 714 | 3.9E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 833 | 1027 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1027 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 902 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 962 | 977 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 978 | 1002 | - | - |
| Coils | Coil | Coil | 407 | 427 | - | - |
| Coils | Coil | Coil | 290 | 381 | - | - |
| Coils | Coil | Coil | 809 | 836 | - | - |
| Coils | Coil | Coil | 449 | 469 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.5 | - | 0 |
| RefSeq | XP_021857174.1 | kinesin-like protein KIN-14P [Spinacia oleracea] | 0 |
| Q5JKW1 | Kinesin-like protein KIN-14C OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14C PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q9M8 | Calponin-homology (CH) domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_203960 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology