Basic Information
Locus ID:
gene_19826
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 11018680 | 11023286 | + | gene_19826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 80,645.16 Da | 36.39 | 65.10 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 1.38942E-19 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 8.1E-20 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 457 | 661 | 4.5E-73 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 55 | 131 | 1.57E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 142 | 4.7E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 6.7E-22 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.92305 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 8.6E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 8.6E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 8.6E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 309 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_048500460.1 | uncharacterized protein LOC104908022 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q0AKB3 | Chaperone protein DnaJ OS=Maricaulis maris (strain MCS10) OX=394221 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9RFM3 | J domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_072000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology