halophFGD

Basic Information

Locus ID: gene_19823

Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544

Genome Assembly: Koichi Toyokura Assembly

Description: non-specific phospholipase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Super-Scaffold_1_Chr_9	10994316	11001321	+	gene_19823

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.82	65,288.16 Da	36.98	74.58	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04185	Phosphoesterase family	3	361	1.5E-102	IPR007312
SUPERFAMILY	SSF53649	Alkaline phosphatase-like	113	359	3.6E-7	IPR017850
Gene3D	G3DSA:3.40.720.10	Alkaline Phosphatase, subunit A	233	409	1.6E-49	IPR017850
Gene3D	G3DSA:3.40.720.10	Alkaline Phosphatase, subunit A	1	163	1.2E-28	IPR017850

Gene Ontology

Molecular Function:

GO:0003824 (catalytic activity) GO:0016788 (hydrolase activity, acting on ester bonds)

KEGG Pathway

KO Term:

K01114 (phospholipase C [EC:3.1.4.3])

Pathway:

ko00562 (Inositol phosphate metabolism) map00562 (Inositol phosphate metabolism) ko00564 (Glycerophospholipid metabolism) map00564 (Glycerophospholipid metabolism) ko00565 (Ether lipid metabolism) map00565 (Ether lipid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko02024 (Quorum sensing) map02024 (Quorum sensing)

Reaction:

R01312 (Phosphatidylcholine + H2O <=> 1,2-Diacyl-sn-glycerol + Choline phosphate) R02027 (Phosphatidylglycerol + H2O <=> 1,2-Diacyl-sn-glycerol + sn-Glycerol 3-phosphate) R02052 (Phosphatidylethanolamine + H2O <=> 1,2-Diacyl-sn-glycerol + Ethanolamine phosphate) R03332 (1-Phosphatidyl-D-myo-inositol + H2O <=> Inositol 1-phosphate + 1,2-Diacyl-sn-glycerol) R07381 (O-1-Alk-1-enyl-2-acyl-sn-glycero-3-phosphoethanolamine + H2O <=> 1-Alkenyl-2-acylglycerol + Ethanolamine phosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G48610.1	non-specific phospholipase C6.
RefSeq	XP_010695377.1	non-specific phospholipase C6 isoform X1 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q8H965	Non-specific phospholipase C6 OS=Arabidopsis thaliana OX=3702 GN=NPC6 PE=2 SV=1
TrEMBL	A0A5B7B1B1	Putative non-specific phospholipase C6-like OS=Davidia involucrata OX=16924 GN=Din_031319 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	8	jg13373, jg16656, jg1696, jg18453, jg20015, jg29107, jg29109 ... jg38014
Aizoaceae	Mesembryanthemum crystallinum	6	gene_11586, gene_1248, gene_1249, gene_1250, gene_19823 ... gene_6910
Amaranthaceae	Atriplex hortensis	5	Ah001804, Ah005074, Ah023390, Ah023392, Ah027856
Amaranthaceae	Beta vulgaris	2	BVRB_4g073710, BVRB_7g172340
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg29034, Sbi_jg29035, Sbi_jg29080, Sbi_jg31756 ... Sbi_jg3260, Sbi_jg3300, Sbi_jg34959, Sbi_jg62445
Amaranthaceae	Salicornia europaea	6	Seu_jg1019, Seu_jg25228, Seu_jg3149, Seu_jg6636, Seu_jg6670 ... Seu_jg6671
Amaranthaceae	Suaeda aralocaspica	6	GOSA_00000081, GOSA_00000082, GOSA_00000115, GOSA_00003348 ... GOSA_00007209, GOSA_00029284
Amaranthaceae	Suaeda glauca	13	Sgl11471, Sgl11526, Sgl11527, Sgl16871, Sgl16903, Sgl16904 ... Sgl17024, Sgl17025, Sgl54144, Sgl59145, Sgl59462, Sgl72771, Sgl76309
Amaranthaceae	Chenopodium album	11	gene:ENSEOMG00000007418, gene:ENSEOMG00000007658 ... gene:ENSEOMG00000009522, gene:ENSEOMG00000012764, gene:ENSEOMG00000015490, gene:ENSEOMG00000030200, gene:ENSEOMG00000034183, gene:ENSEOMG00000039827, gene:ENSEOMG00000043204, gene:ENSEOMG00000048727, gene:ENSEOMG00000050641
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1AG0008250, CQ.Regalona.r1.2BG0021150 ... CQ.Regalona.r1.4AG0002220, CQ.Regalona.r1.5AG0017100, CQ.Regalona.r1.5BG0018400, CQ.Regalona.r1.9BG0001480
Anacardiaceae	Pistacia vera	4	pistato.v30011940, pistato.v30061550, pistato.v30094120 ... pistato.v30095350
Apiaceae	Apium graveolens	4	Ag10G00220, Ag10G00363, Ag11G04136, Ag6G01511
Arecaceae	Cocos nucifera	7	COCNU_02G009060, COCNU_02G017890, COCNU_04G000240 ... COCNU_07G003790, COCNU_14G006670, COCNU_16G002010, scaffold031403G000010
Arecaceae	Phoenix dactylifera	6	gene-LOC103701653, gene-LOC103707853, gene-LOC103711783 ... gene-LOC103716538, gene-LOC103716925, gene-LOC103719809
Asparagaceae	Asparagus officinalis	5	AsparagusV1_02.1110.V1.1, AsparagusV1_04.1671.V1.1 ... AsparagusV1_07.1695.V1.1, AsparagusV1_08.2027.V1.1, AsparagusV1_10.479.V1.1
Asteraceae	Flaveria trinervia	4	Ftri18G15666, Ftri5G14721, Ftri5G21205, Ftri9G04605
Brassicaceae	Arabidopsis thaliana	6	AT1G07230.1, AT2G26870.1, AT3G03520.1, AT3G03530.1 ... AT3G03540.1, AT3G48610.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10001963m.g.v1.0, Thhalv10007332m.g.v1.0 ... Thhalv10010294m.g.v1.0, Thhalv10020472m.g.v1.0, Thhalv10020514m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g05990.v2.2, Sp3g02510.v2.2, Sp3g02520.v2.2 ... Sp4g08610.v2.2, Sp5g13360.v2.2
Brassicaceae	Brassica nigra	7	BniB01g016910.2N, BniB01g059830.2N, BniB01g059840.2N ... BniB05g049030.2N, BniB06g043450.2N, BniB07g060640.2N, BniB08g061860.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq01G2030, Ceq05G1618, Ceq05G1619, Ceq08G1512, Ceq08G1888
Casuarinaceae	Casuarina glauca	5	Cgl01G2207, Cgl01G2229, Cgl05G1614, Cgl08G1545, Cgl08G1943
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g18650, gene.Cymno03g08600, gene.Cymno04g06470 ... gene.Cymno07g03750
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate01g16210, gene.Thate02g07190, gene.Thate05g09790 ... gene.Thate07g13350
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG03.1878, evm.TU.LG03.1879, evm.TU.LG03.1881 ... evm.TU.LG05.646, evm.TU.LG09.1105, evm.TU.LG09.130
Plantaginaceae	Plantago ovata	5	Pov_00016305, Pov_00016927, Pov_00017208, Pov_00031238 ... Pov_00033556
Plumbaginaceae	Limonium bicolor	6	Lb0G36898, Lb3G15616, Lb3G19556, Lb3G20103, Lb3G20105 ... Lb5G27263
Poaceae	Echinochloa crus-galli	15	AH01.446, AH02.1071, AH02.4547, AH04.1809, BH01.120 ... BH01.295, BH02.1040, BH02.4601, BH04.1836, CH01.135, CH02.1149, CH02.4650, CH04.156, CH04.2065, CH09.3319
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0006150, gene-QOZ80_1AG0046980 ... gene-QOZ80_1BG0054870, gene-QOZ80_1BG0096840, gene-QOZ80_3AG0207960, gene-QOZ80_3AG0209930, gene-QOZ80_3BG0252990, gene-QOZ80_3BG0255120, gene-QOZ80_9AG0683600, gene-QOZ80_9BG0709670
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0085590.1, HORVU.MOREX.r3.3HG0232030.1 ... HORVU.MOREX.r3.3HG0322080.1, HORVU.MOREX.r3.5HG0527960.1, HORVU.MOREX.r3.7HG0752530.1.CDS1
Poaceae	Lolium multiflorum	4	gene-QYE76_026031, gene-QYE76_058204, gene-QYE76_060575 ... gene-QYE76_063249
Poaceae	Oryza coarctata	9	Oco01G030180, Oco02G000120, Oco02G031350, Oco05G027820 ... Oco05G029150, Oco06G028800, Oco06G030170, Oco21G007970, Oco22G009200
Poaceae	Oryza sativa	5	LOC_Os01g01190.1, LOC_Os01g72520.1, LOC_Os03g61130.1 ... LOC_Os03g63580.1, LOC_Os11g38050.1
Poaceae	Paspalum vaginatum	9	gene-BS78_01G007300, gene-BS78_01G025500, gene-BS78_K134700 ... gene-BS78_03G097100, gene-BS78_03G405800, gene-BS78_05G187900, gene-BS78_05G188200, gene-BS78_K279500, gene-BS78_K280000
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0105876, Pt_Chr0206276, Pt_Chr0206293, Pt_Chr0605452 ... Pt_Ctg00069
Poaceae	Sporobolus alterniflorus	13	Chr01G001170, Chr02G000850, Chr02G002380, Chr02G025650 ... Chr04G031790, Chr05G003370, Chr05G032100, Chr05G033930, Chr07G030820, Chr0G004160, Chr10G008310, Chr12G032800, Chr16G005190
Poaceae	Thinopyrum elongatum	5	Tel3E01G148900, Tel3E01G806000, Tel3E01G807100 ... Tel4E01G035900, Tel5E01G776700
Poaceae	Triticum dicoccoides	9	gene_TRIDC3AG009960, gene_TRIDC3AG070420 ... gene_TRIDC3BG013660, gene_TRIDC3BG079720, gene_TRIDC4AG045760, gene_TRIDC4AG054990, gene_TRIDC4BG002660, gene_TRIDC5AG069750, gene_TRIDC5BG075680
Poaceae	Triticum aestivum	15	TraesCS3A02G083200.1, TraesCS3A02G439600.2 ... TraesCS3A02G492100.1, TraesCS3B02G098100.1, TraesCS3B02G552800.1, TraesCS3B02G553200.1, TraesCS3D02G083000.1, TraesCS3D02G499600.2, TraesCS4A02G298300.1, TraesCS4A02G369500.1, TraesCS4B02G015300.1, TraesCS4D02G013500.1, TraesCS5A02G489800.2, TraesCS5B02G503200.1, TraesCS5D02G504100.1
Poaceae	Zea mays	5	Zm00001eb063230_P001, Zm00001eb064750_P001 ... Zm00001eb127030_P001, Zm00001eb140620_P001, Zm00001eb211410_P001
Poaceae	Zoysia japonica	5	nbis-gene-15549, nbis-gene-15678, nbis-gene-28133 ... nbis-gene-32370, nbis-gene-43094
Poaceae	Zoysia macrostachya	5	Zma_g11958, Zma_g133, Zma_g2454, Zma_g35, Zma_g7450
Portulacaceae	Portulaca oleracea	12	evm.TU.LG02.218, evm.TU.LG03.1700, evm.TU.LG04.1729 ... evm.TU.LG04.1732, evm.TU.LG04.1733, evm.TU.LG08.1428, evm.TU.LG09.1458, evm.TU.LG10.1220, evm.TU.LG10.1223, evm.TU.LG10.1224, evm.TU.LG14.144, evm.TU.LG22.324
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g13600, gene.Posoc02g00080, gene.Posoc02g21030 ... gene.Posoc05g13030, gene.Posoc07g00450
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_11_RagTag.1141, evm.TU.Scaffold_12_RagTag.77 ... evm.TU.Scaffold_12_RagTag.137, evm.TU.Scaffold_1_RagTag.507
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-12336, nbisL1-mrna-24661, nbisL1-mrna-24723 ... nbisL1-mrna-7656
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-18703, nbisL1-mrna-3762, nbisL1-mrna-4573 ... nbisL1-mrna-96
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-12718, nbisL1-mrna-19386, nbisL1-mrna-19447 ... nbisL1-mrna-5534
Rhizophoraceae	Kandelia candel	9	add.evm.TU.utg000010l.80, add.evm.TU.utg000010l.82 ... add.evm.TU.utg000010l.85, evm.TU.utg000010l.210, evm.TU.utg000010l.211, evm.TU.utg000010l.212, evm.TU.utg000012l.312, evm.TU.utg000027l.483, evm.TU.utg000027l.526
Rhizophoraceae	Kandelia obovata	6	Maker00008449, Maker00008792, Maker00009052, Maker00010986 ... Maker00018013, Maker00018222
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-5470, nbisL1-mrna-5506, nbisL1-mrna-653 ... nbisL1-mrna-8483
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11616, nbisL1-mrna-11669, nbisL1-mrna-646 ... nbisL1-mrna-8792
Salicaceae	Populus euphratica	10	populus_peu01787, populus_peu02013, populus_peu02019 ... populus_peu28475, populus_peu28872, populus_peu30272, populus_peu33563, populus_peu35795, populus_peu36031, populus_peu37485
Solanaceae	Lycium barbarum	3	gene-LOC132626385, gene-LOC132631185, gene-LOC132632463
Solanaceae	Solanum chilense	3	SOLCI001222800, SOLCI001492300, SOLCI001822800
Solanaceae	Solanum pennellii	3	gene-LOC107008090, gene-LOC107012102, gene-LOC107029460
Tamaricaceae	Reaumuria soongarica	6	STRG.15792_chr06_-, STRG.27951_chr04_-, STRG.9393_chr03_+ ... gene_15711, gene_9515, gene_9516
Tamaricaceae	Tamarix chinensis	4	TC02G2922, TC03G1913, TC09G0825, TC11G1186
Zosteraceae	Zostera marina	4	Zosma02g03920.v3.1, Zosma02g07220.v3.1, Zosma02g18350.v3.1 ... Zosma06g20290.v3.1