Basic Information
Locus ID:
gene_19593
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 5733641 | 5745371 | + | gene_19593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 113,722.24 Da | 55.18 | 88.59 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 604 | 749 | 2.89799E-18 | - |
| CDD | cd12108 | Hr-like | 31 | 165 | 5.71161E-22 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 604 | 750 | 6.5E-6 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 28 | 167 | 8.5E-12 | IPR012312 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 28 | 185 | 1.0E-21 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 593 | 799 | 1.8E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 298 | 442 | 6.0E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18910.1 | zinc ion binding;zinc ion binding. | 0 |
| RefSeq | XP_010678609.1 | zinc finger protein BRUTUS-like At1g18910 [Beta vulgaris subsp. vulgaris] | 0 |
| F4IDY5 | Zinc finger protein BRUTUS-like At1g18910 OS=Arabidopsis thaliana OX=3702 GN=At1g18910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RX52 | Zinc finger protein BRUTUS-like At1g18910 OS=Spinacia oleracea OX=3562 GN=SOVF_024830 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology