Basic Information
Locus ID:
gene_19377
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
ATMRK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 2404151 | 2409167 | + | gene_19377 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 52,704.81 Da | 29.45 | 72.80 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 177 | 448 | 6.75642E-111 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 172 | 448 | 4.6E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 152 | 448 | 2.05E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 159 | 252 | 8.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 460 | 5.3E-60 | - |
| SMART | SM00220 | serkin_6 | 171 | 451 | 1.0E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 171 | 451 | 41.671993 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 315 | 327 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 271 | 284 | 4.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 309 | 327 | 4.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 375 | 397 | 4.5E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 419 | 441 | 4.5E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_019105321.1 | serine/threonine-protein kinase STY13 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DF09 | Dual-specificity kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology