Basic Information
Locus ID:
gene_18978
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 33806261 | 33812757 | + | gene_18978 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 64,333.89 Da | 49.87 | 84.95 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 120 | 382 | 7.51862E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 121 | 383 | 1.6E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 413 | 565 | 7.32E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 117 | 448 | 9.98E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 398 | 1.5E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 403 | 565 | 1.7E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 113 | 210 | 3.6E-22 | - |
| SMART | SM00220 | serkin_6 | 121 | 383 | 1.4E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 121 | 383 | 50.477474 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 127 | 153 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 245 | 257 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_021838944.1 | CDPK-related kinase 7-like [Spinacia oleracea] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QVG2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_141970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology