Basic Information
Locus ID:
gene_18735
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 24891256 | 24898917 | + | gene_18735 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 54,568.07 Da | 47.30 | 88.12 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 350 | 8.0E-82 | IPR000490 |
| Pfam | PF07983 | X8 domain | 368 | 439 | 3.4E-16 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 350 | 1.24E-84 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 356 | 1.1E-113 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 361 | 456 | 1.3E-8 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 2.5E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 265 | 278 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021727203.1 | glucan endo-1,3-beta-glucosidase 3-like [Chenopodium quinoa] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C9AUR5 | Glucan endo-1,3-beta-D-glucosidase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology