Basic Information
Locus ID:
gene_1870
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 2661278 | 2668676 | - | gene_1870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 73,524.09 Da | 51.30 | 76.44 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 395 | 641 | 3.3517E-125 | - |
| CDD | cd00130 | PAS | 86 | 182 | 2.20723E-10 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 640 | 8.7E-66 | IPR001245 |
| Pfam | PF13426 | PAS domain | 91 | 182 | 1.8E-10 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 639 | 1.2E-78 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 74 | 182 | 1.55E-16 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 654 | 2.2E-58 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 84 | 185 | 2.3E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 466 | 1.0E-26 | - |
| SMART | SM00220 | serkin_6 | 389 | 645 | 8.5E-53 | IPR000719 |
| SMART | SM00091 | pas_2 | 71 | 139 | 3.1E-4 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 89 | 182 | 3.3E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 389 | 645 | 43.509411 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 90 | 141 | 11.680758 | IPR000014 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 395 | 416 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 508 | 520 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 568 | 590 | 5.2E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 463 | 476 | 5.2E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 502 | 520 | 5.2E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 612 | 634 | 5.2E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 549 | 559 | 5.2E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 61 | - | - |
| Coils | Coil | Coil | 11 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021735907.1 | dual specificity protein kinase shkD-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJM6 | Serine/threonine-protein kinase CTR1 OS=Spinacia oleracea OX=3562 GN=SOVF_177990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology