Basic Information
Locus ID:
gene_18455
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 10509121 | 10515322 | + | gene_18455 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 35,783.18 Da | 44.05 | 91.40 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 22 | 322 | 7.2E-72 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 17 | 326 | 6.8E-79 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 9 | 322 | 1.9E-97 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 2 | 250 | 8.9E-8 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 281 | 329 | 4.8 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 323 | 47.985699 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_021723815.1 | homocysteine S-methyltransferase 1-like [Chenopodium quinoa] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4S7 | Hcy-binding domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_113320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology