Basic Information
Locus ID:
gene_18375
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 8024721 | 8025847 | + | gene_18375 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 36,750.16 Da | 46.77 | 79.87 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 174 | 277 | 2.2E-8 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 79 | 1.44E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 34 | 2.2E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 99 | 304 | 2.5E-21 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67130.1 | F-box family protein. | 0 |
| RefSeq | XP_009141214.1 | F-box protein At5g65850-like [Brassica rapa] | 0 |
| Q3ECH0 | F-box protein At1g67130 OS=Arabidopsis thaliana OX=3702 GN=At1g67130 PE=2 SV=3 | 0 | |
| TrEMBL | A0A8S9I697 | F-box domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q68_00027835 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 18 | gene_18345, gene_18346, gene_18375, gene_18411, gene_18412 ... |