Basic Information
Locus ID:
gene_18369
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box FBD LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 7959751 | 7961234 | + | gene_18369 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 37,717.78 Da | 51.15 | 102.17 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 21 | 246 | 3.3E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 269 | 7.3E-14 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_009355802.2 | F-box/FBD/LRR-repeat protein At1g13570 [Pyrus x bretschneideri] | 0 |
| TrEMBL | A0A5N5H8P3 | F-box/FBD/LRR-repeat protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_016036 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_18365, gene_18366, gene_18368, gene_18369, gene_18371 ... |
| Amaranthaceae | Suaeda glauca | 3 | Sgl80012, Sgl80028, Sgl82459 |