Basic Information
Locus ID:
gene_18337
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 7437368 | 7445661 | + | gene_18337 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 90,550.95 Da | 44.42 | 78.34 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 289 | 5.34975E-101 | - |
| Pfam | PF00183 | Hsp90 protein | 271 | 767 | 2.1E-195 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 265 | 9.4E-13 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 341 | 599 | 1.67E-91 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 299 | 2.75E-62 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 621 | 743 | 9.29E-34 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 512 | 599 | 6.0E-33 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 71 | 313 | 1.9E-89 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 339 | 511 | 4.7E-75 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 600 | 746 | 6.1E-52 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 107 | 268 | 7.5E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 51 | 788 | 2.7E-241 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 6.1E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 6.1E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 201 | 223 | 6.1E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 275 | 293 | 6.1E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 6.1E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 256 | 273 | 6.1E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 6.1E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 75 | 743 | 26.147703 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 794 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_021718317.1 | heat shock protein 90-5, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7L2 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology