Basic Information
Locus ID:
gene_1832
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 2045668 | 2059166 | - | gene_1832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 110,360.14 Da | 48.98 | 81.51 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 37 | 135 | 7.9E-9 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 494 | 814 | 3.1E-103 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 488 | 853 | 6.65E-118 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 35 | 133 | 3.27E-15 | IPR036872 |
| Gene3D | G3DSA:1.20.5.170 | - | 326 | 363 | 3.9E-5 | - |
| Gene3D | G3DSA:1.10.418.10 | - | 33 | 137 | 1.4E-13 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 429 | 818 | 1.4E-128 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 486 | 824 | 7.1E-156 | IPR001752 |
| SMART | SM00033 | ch_5 | 35 | 131 | 4.9E-6 | IPR001715 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 33 | 136 | 16.124872 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 488 | 816 | 108.201996 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 686 | 703 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 717 | 735 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 766 | 787 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 563 | 584 | 1.8E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 984 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 978 | - | - |
| Coils | Coil | Coil | 391 | 414 | - | - |
| Coils | Coil | Coil | 830 | 857 | - | - |
| Coils | Coil | Coil | 309 | 368 | - | - |
| Coils | Coil | Coil | 249 | 276 | - | - |
| Coils | Coil | Coil | 419 | 439 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_021839012.1 | kinesin-like protein KIN-14J [Spinacia oleracea] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RNN7 | Kinesin-4 OS=Spinacia oleracea OX=3562 GN=SOVF_046070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology