Basic Information
Locus ID:
gene_1813
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 100838467 | 100844525 | - | gene_1813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 39,002.98 Da | 48.20 | 74.22 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 72 | 348 | 1.5E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 238 | 340 | 5.89E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 235 | 354 | 1.9E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 240 | 341 | 27.520386 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 204 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_008338995.2 | auxin-responsive protein IAA9-like isoform X1 [Malus domestica] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6ZN18 | Auxin-responsive protein OS=Davidia involucrata OX=16924 GN=Din_015378 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology