Basic Information
Locus ID:
gene_18061
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 1690264 | 1702616 | + | gene_18061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 74,698.08 Da | 41.75 | 95.58 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 316 | 577 | 1.0E-42 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 242 | 2.0E-6 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 39 | 130 | 1.2E-15 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 302 | 634 | 9.44E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 132 | 2.7E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 244 | 4.9E-11 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 391 | 623 | 8.5E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 289 | 390 | 4.4E-26 | - |
| SMART | SM00220 | serkin_6 | 313 | 615 | 2.0E-27 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 139 | 245 | 11.365361 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 313 | 615 | 35.551968 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 30 | 133 | 15.656057 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 441 | 453 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 319 | 341 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010682481.2 | proline-rich receptor-like protein kinase PERK15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LEM8 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18060, gene_18061 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013809 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g147530 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45383 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002550 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35133, Sgl40507 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.116 |