Basic Information
Locus ID:
gene_1802
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 1544140 | 1548301 | - | gene_1802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 81,703.90 Da | 41.52 | 83.06 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 21 | 215 | 3.49638E-98 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 34 | 167 | 2.1E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 197 | 703 | 7.9E-237 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 274 | 529 | 1.37E-109 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 552 | 674 | 1.26E-38 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 12 | 226 | 6.77E-65 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 442 | 528 | 3.4E-41 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 273 | 441 | 2.2E-86 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 529 | 679 | 6.1E-67 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 10 | 241 | 5.0E-88 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 34 | 172 | 2.0E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 3 | 710 | 3.3E-254 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 32 | 41 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 12 | 32 | 3.4E-73 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 201 | 219 | 3.4E-73 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 125 | 147 | 3.4E-73 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 82 | 99 | 3.4E-73 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 33 | 55 | 3.4E-73 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 100 | 117 | 3.4E-73 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 9 | 675 | 26.741751 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 710 | - | - |
| Coils | Coil | Coil | 232 | 252 | - | - |
| Coils | Coil | Coil | 526 | 553 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_031129784.1 | heat shock protein 83-like [Ipomoea triloba] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A067G9H4 | HATPase_c domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g005321mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology