Basic Information
Locus ID:
gene_18008
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 923362 | 928709 | + | gene_18008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 90,070.76 Da | 41.38 | 67.03 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 143 | 196 | 2.1444E-20 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 143 | 204 | 2.6E-22 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 535 | 741 | 1.5E-73 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 140 | 233 | 2.49E-23 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 140 | 265 | 5.7E-25 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 142 | 199 | 6.9E-24 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 143 | 207 | 18.85111 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 184 | 203 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 199 | 218 | 2.4E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 145 | 163 | 2.4E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 179 | 199 | 2.4E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 163 | 178 | 2.4E-14 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 227 | - | - |
| Coils | Coil | Coil | 366 | 393 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25560.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_010682744.1 | uncharacterized protein LOC104897549 [Beta vulgaris subsp. vulgaris] | 0 |
| Q7ZXQ8 | DnaJ homolog subfamily B member 14 OS=Xenopus laevis OX=8355 GN=dnajb14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L194 | J domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology