Basic Information
Locus ID:
gene_17890
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 41541726 | 41546840 | - | gene_17890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 65,928.96 Da | 33.96 | 104.49 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 46 | 3.0E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 102 | 1.28E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 134 | 352 | 1.14E-5 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 48 | 3.3E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 119 | 320 | 5.6E-7 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18780.3 | - | 0 |
| RefSeq | XP_021755129.1 | F-box/FBD/LRR-repeat protein At5g56420-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803M4E2 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology