Basic Information
Locus ID:
gene_1786
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 1171652 | 1177055 | - | gene_1786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 62,683.44 Da | 44.70 | 78.35 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 142 | 224 | 2.38509E-16 | - |
| Pfam | PF00651 | BTB/POZ domain | 141 | 238 | 1.6E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 264 | 357 | 9.8E-11 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 438 | 551 | 1.41E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 146 | 238 | 1.1E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 133 | 259 | 1.4E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 273 | 379 | 1.5E-14 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 427 | 552 | 5.9E-6 | IPR008974 |
| SMART | SM00225 | BTB_4 | 141 | 241 | 6.2E-8 | IPR000210 |
| SMART | SM00875 | BACK_2 | 256 | 358 | 4.0E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 141 | 210 | 13.735893 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_021757599.1 | BTB/POZ domain-containing protein POB1-like [Chenopodium quinoa] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9CR70 | BTB domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology