Basic Information
Locus ID:
gene_17790
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 105985868 | 105994430 | + | gene_17790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 41,543.47 Da | 42.12 | 79.30 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 311 | 359 | 4.4E-11 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 49 | 260 | 3.53E-24 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 293 | 361 | 1.84E-16 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 45 | 270 | 2.9E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 309 | 361 | 1.9E-16 | - |
| SMART | SM00326 | SH3_2 | 307 | 362 | 9.7E-14 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 304 | 363 | 20.037888 | IPR001452 |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 329 | 345 | 2.4E-5 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 309 | 329 | 2.4E-5 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 345 | 358 | 2.4E-5 | - |
| Coils | Coil | Coil | 109 | 133 | - | - |
| Coils | Coil | Coil | 151 | 171 | - | - |
| Coils | Coil | Coil | 246 | 266 | - | - |
| Coils | Coil | Coil | 188 | 242 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_010690773.1 | SH3 domain-containing protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W0M4 | SH3 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_04G084500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology