Basic Information
Locus ID:
gene_17668
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 88149186 | 88161390 | + | gene_17668 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 78,107.23 Da | 48.09 | 86.28 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 277 | 310 | 0.00764745 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 684 | 2.3E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 71 | 1.9E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 155 | 3.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 161 | 203 | 7.6E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 684 | 6.51E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 235 | 3.95E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 712 | 7.1E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 250 | 6.9E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 390 | 493 | 2.0E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 213 | 150.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 687 | 32.032604 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 695 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 261 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021847454.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Spinacia oleracea] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZV23 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology