Basic Information
Locus ID:
gene_17665
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 36406724 | 36418208 | - | gene_17665 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 110,866.11 Da | 31.02 | 88.31 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 678 | 945 | 4.50935E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 157 | 216 | 2.1E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 673 | 940 | 4.1E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 658 | 954 | 1.62E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 80 | 422 | 5.1E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 648 | 747 | 3.0E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 748 | 960 | 4.0E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 326 | 3.8E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 452 | 4.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 70 | 226 | 8.2E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 672 | 971 | 8.5E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 672 | 946 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 792 | 804 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 678 | 700 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720987.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology