Basic Information
Locus ID:
gene_17559
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 33384596 | 33386368 | - | gene_17559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 36,861.19 Da | 30.75 | 91.27 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 19 | 307 | 1.0E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 306 | 3.64E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 90 | 1.3E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 321 | 3.0E-52 | - |
| SMART | SM00220 | serkin_6 | 16 | 306 | 7.0E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 326 | 34.180973 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 44 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 161 | 173 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23170.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002264141.1 | PREDICTED: serine/threonine-protein kinase-like protein At5g23170 [Vitis vinifera] | 0 |
| Q9FMY3 | Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana OX=3702 GN=At5g23170 PE=2 SV=1 | 0 | |
| TrEMBL | A0A834G5Q1 | Protein kinase domain-containing protein OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim11G0125800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology