Basic Information
Locus ID:
gene_17504
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Protein kinase PVPK-1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 30995995 | 31000167 | - | gene_17504 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 70,075.67 Da | 53.16 | 73.50 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 247 | 599 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 477 | 580 | 7.4E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 249 | 403 | 2.0E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 225 | 610 | 2.8E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 247 | 331 | 6.7E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 332 | 431 | 6.7E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 475 | 597 | 8.5E-36 | - |
| SMART | SM00220 | serkin_6 | 248 | 580 | 1.4E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 248 | 580 | 44.088905 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 220 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55910.1 | D6 protein kinase. D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation. | 0 |
| RefSeq | XP_010681851.1 | serine/threonine-protein kinase D6PK [Beta vulgaris subsp. vulgaris] | 0 |
| P15792 | Protein kinase PVPK-1 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8C2T0 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_6g143900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology