Basic Information
Locus ID:
gene_17487
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 30495405 | 30499843 | - | gene_17487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 36,534.73 Da | 42.49 | 84.71 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 34 | 258 | 2.75465E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 32 | 199 | 2.2E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 284 | 3.91E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 107 | 6.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 206 | 6.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 207 | 271 | 3.5E-5 | - |
| SMART | SM00220 | serkin_6 | 28 | 262 | 5.4E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 28 | 262 | 31.990202 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 148 | 160 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 34 | 55 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021595395.1 | serine/threonine-protein kinase STY13 [Manihot esculenta] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9UH71 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_15G151400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology