Basic Information
Locus ID:
gene_17023
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
inactive receptor-like protein kinase At3g56050
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 10996291 | 11003803 | - | gene_17023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 100,614.00 Da | 40.73 | 88.13 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01190 | Pollen protein Ole e 1 like | 763 | 861 | 3.6E-27 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 74 | 2.7E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 649 | 5.0E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 650 | 9.66E-39 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 197 | 2.21E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 2.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 357 | 469 | 4.5E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 663 | 4.9E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 654 | 18.37916 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_021732521.1 | probable inactive receptor-like protein kinase At3g56050 [Chenopodium quinoa] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9FC81 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology