Basic Information
Locus ID:
gene_17004
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 10460674 | 10463827 | - | gene_17004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 79,021.74 Da | 45.40 | 83.06 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 435 | 716 | 6.9E-43 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 98 | 123 | 1.1E-4 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 27 | 205 | 1.74E-16 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 719 | 4.72E-73 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 92 | 303 | 5.7E-21 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 395 | 515 | 4.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 516 | 732 | 5.6E-50 | - |
| SMART | SM00220 | serkin_6 | 434 | 723 | 3.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 733 | 37.050175 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 440 | 473 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 565 | 577 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_010689641.2 | putative serine/threonine-protein kinase-like protein CCR3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M3T7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology