Basic Information
Locus ID:
gene_17003
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 10428754 | 10430109 | - | gene_17003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 44,468.53 Da | 39.79 | 79.49 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 87 | 409 | 5.18607E-71 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 252 | 405 | 1.7E-26 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 153 | 229 | 2.4E-17 | IPR032861 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 88 | 144 | 2.7E-18 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 83 | 410 | 4.33E-74 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 72 | 146 | 1.4E-21 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 230 | 412 | 1.5E-46 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 147 | 229 | 6.7E-16 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 88 | 405 | 34.83255 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 288 | 299 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 103 | 114 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64830.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_010666175.3 | aspartic proteinase CDR1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q3EBM5 | Probable aspartic protease At2g35615 OS=Arabidopsis thaliana OX=3702 GN=At2g35615 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9QT63 | Peptidase A1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_144280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology