Basic Information
Locus ID:
gene_16947
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 9382607 | 9387021 | - | gene_16947 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 109,053.52 Da | 36.48 | 95.00 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 695 | 972 | 7.4E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 74 | 2.2E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 321 | 340 | 1.5 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 437 | 2.51E-59 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 359 | 622 | 3.92E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 976 | 2.16E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 630 | 2.3E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 150 | 1.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 322 | 1.4E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 770 | 2.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 258 | 5.0E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 986 | 1.9E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 991 | 6.4E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 486 | 510 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 197 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 271 | 295 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 223 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 986 | 36.286938 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 699 | 722 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_021855408.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Spinacia oleracea] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RTK5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_031210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology