Basic Information
Locus ID:
gene_16859
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 106618361 | 106623695 | - | gene_16859 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 35,125.51 Da | 51.46 | 67.44 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 1.4E-78 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 7.5E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 6 | 107 | 5.7E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 307 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_016459415.1 | PREDICTED: ubiquitin fusion degradation protein 1 homolog [Nicotiana tabacum] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1S3Z4L7 | ubiquitin fusion degradation protein 1 homolog OS=Nicotiana tabacum OX=4097 GN=LOC107782973 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology