Basic Information
Locus ID:
gene_16741
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 5533546 | 5538211 | - | gene_16741 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 47,212.61 Da | 56.41 | 84.60 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 204 | 245 | 5.34245E-5 | - |
| Pfam | PF02135 | TAZ zinc finger | 286 | 371 | 4.9E-13 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 95 | 199 | 5.8E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 82 | 200 | 2.04E-15 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 279 | 380 | 3.01E-23 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 278 | 400 | 1.4E-23 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 203 | 277 | 5.9E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 75 | 201 | 1.4E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 102 | 202 | 5.3E-11 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 279 | 372 | 3.8E-36 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 102 | 170 | 11.729739 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67480.1 | BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_021751426.1 | BTB/POZ and TAZ domain-containing protein 4-like [Chenopodium quinoa] | 0 |
| Q9FJX5 | BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BT4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YD63 | Histone acetyltransferase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology