Basic Information
Locus ID:
gene_16739
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 86882548 | 86906372 | - | gene_16739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 29,675.47 Da | 55.98 | 95.19 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 72 | 120 | 6.77388E-19 | - |
| Pfam | PF12906 | RING-variant domain | 72 | 119 | 2.5E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 67 | 123 | 9.08E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 124 | 9.2E-18 | IPR013083 |
| SMART | SM00744 | ringv_2 | 71 | 120 | 4.2E-17 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 64 | 126 | 21.406689 | IPR011016 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50440.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_010694496.1 | E3 ubiquitin-protein ligase MARCHF8 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0J8BEF4 | RING-CH-type domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_4g093560 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology