HalophFGD

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Basic Information
Locus ID: gene_16719
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: F-box protein At3g07870-like
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_4_Chr_5 5208373 5210248 - gene_16719
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.70 20,007.73 Da 61.66 89.65 -0.42
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 10 46 2.0E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 10 92 2.75E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 8 46 8.4E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_050278510.1 F-box/kelch-repeat protein At3g23880-like [Quercus robur] 0
TrEMBL A0A834GL07 F-box domain-containing protein OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim08G0032700 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 8 gene_10790, gene_15721, gene_16719, gene_16720, gene_16746 ...
gene_1909, gene_23270, gene_23976
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.