Basic Information
Locus ID:
gene_1663
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 43963992 | 43969201 | - | gene_1663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 62,798.30 Da | 51.68 | 75.47 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 145 | 223 | 2.49019E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 263 | 355 | 9.8E-11 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 144 | 237 | 7.0E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 439 | 550 | 7.85E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 149 | 237 | 1.02E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 260 | 2.8E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 272 | 378 | 3.5E-14 | - |
| SMART | SM00225 | BTB_4 | 142 | 240 | 1.5E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 255 | 357 | 4.2E-11 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 140 | 209 | 12.557019 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_010669540.2 | BTB/POZ domain-containing protein POB1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C8Z198 | BTB domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology